Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
tnpo3Transportin-3 isoform X1. (937 aa)    
Predicted Functional Partners:
LOC107552397
Importin-9-like.
   
 
 0.935
LOC107570969
Importin subunit beta-1-like.
   
 
 0.927
LOC107573070
Importin subunit beta-1.
   
 
 0.927
LOC107555887
Cleavage and polyadenylation specificity factor subunit 6.
   
 0.918
ENSSGRP00000111552
Cleavage and polyadenylation specific factor 6.
   
 0.918
ENSSGRP00000027138
Importin-7.
   
 
 0.913
ipo7
Importin-7 isoform X1.
   
 
 0.913
LOC107592249
Importin-8-like.
   
 
 0.900
LOC107580646
Importin-8-like isoform X1.
   
 
 0.900
LOC107591938
Peptidyl-prolyl isomerase F (cyclophilin D).
   
 
 0.893
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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