STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnpo3Transportin-3 isoform X1. (937 aa)    
Predicted Functional Partners:
LOC107554282
Serine/arginine-rich splicing factor 1A.
   
 
 0.857
LOC107582602
Serine/arginine-rich splicing factor 1A-like.
   
 
 0.857
ENSSGRP00000109055
Serine/arginine-rich splicing factor 1B.
   
 
 0.857
LOC107569008
Bifunctional glutamate/proline--tRNA ligase-like.
   
    0.829
ENSSGRP00000108769
Bifunctional glutamate/proline--tRNA ligase-like isoform X1.
   
    0.829
ENSSGRP00000053089
Guanine nucleotide binding protein-like 3 (nucleolar)-like.
   
  
 0.827
LOC107563333
Guanine nucleotide-binding protein-like 3-like protein.
   
  
 0.827
LOC107552216
Methyl-CpG-binding protein 2-like.
      
 0.807
LOC107584876
Methyl-CpG-binding protein 2-like isoform X1.
      
 0.807
tmem187
Transmembrane protein 187.
      
 0.776
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.