STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001518E3 ubiquitin-protein ligase RFWD3-like. (506 aa)    
Predicted Functional Partners:
LOC107562955
Replication protein A 70 kDa DNA-binding subunit isoform X1.
   
 
 0.933
LOC107548543
Replication protein A 70 kDa DNA-binding subunit-like.
   
 
 0.933
ENSSGRP00000009235
annotation not available
    
 
 0.922
LOC107598208
Replication protein A 14 kDa subunit-like.
    
 
 0.922
LOC107568286
Replication protein A 14 kDa subunit-like.
    
 
 0.922
ENSSGRP00000008207
Primase and polymerase (DNA-directed).
    
 
 0.911
ENSSGRP00000035648
DNA-directed primase/polymerase protein-like.
    
 
 0.911
ENSSGRP00000083488
WRN RecQ like helicase.
    
 
 0.813
ENSSGRP00000009602
Methionine sulfoxide reductase B1b.
   
 
 0.779
ENSSGRP00000068109
Methionine sulfoxide reductase B1b.
   
 
 0.779
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.