STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001519Tubulin--tyrosine ligase like protein 10. (208 aa)    
Predicted Functional Partners:
ENSSGRP00000050885
Dynein regulatory complex subunit 7-like.
   
  
 0.677
ENSSGRP00000016444
MRNA-decapping enzyme subunit 2.
    
 
 0.656
ENSSGRP00000068545
Decapping mRNA 2.
    
 
 0.656
ift52
Intraflagellar transport protein 52 homolog.
      
 0.652
LOC107584512
Tumor necrosis factor receptor superfamily member 18-like isoform X1.
      
 0.647
ENSSGRP00000011528
WD repeat domain 90.
    
 
 0.645
Ift27
Intraflagellar transport protein 27 homolog.
      
 0.643
fopnl
LisH domain-containing protein FOPNL.
   
  
 0.640
ENSSGRP00000003997
Bardet-Biedl syndrome 1 protein-like.
      
 0.633
LOC107597116
Axonemal dynein light intermediate polypeptide 1-like.
   
  
 0.622
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.