Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC107556458Germ cell-specific gene 1-like protein. (302 aa)    
Predicted Functional Partners:
ENSSGRP00000051553
Uncharacterized protein LOC107601557.
      
 0.566
LOC107602965
Protein cornichon homolog 1.
      
 0.513
ENSSGRP00000102225
Cornichon family AMPA receptor auxiliary protein 1.
      
 0.513
SYNDIG1
Synapse differentiation-inducing gene protein 1-like.
      
 0.484
SYNDIG1-2
Synapse differentiation-inducing gene protein 1-like isoform X1.
      
 0.484
ENSSGRP00000019305
Protein shisa-3 homolog.
      
 0.446
ENSSGRP00000044738
Shisa family member 3.
      
 0.446
shisa3
Protein shisa-3 homolog.
      
 0.446
tmem91
Transmembrane protein 91.
      
 0.441
LOC107562693
Synapse differentiation-inducing gene protein 1-like.
      
 0.441
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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