STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107591616Peptidyl-prolyl cis-trans isomerase FKBP9-like. (592 aa)    
Predicted Functional Partners:
LOC107588329
Early growth response protein 1.
    
 0.775
LOC107557684
Early growth response protein 1-like.
    
 0.775
LOC107574438
Early growth response protein 1-B-like.
    
 0.726
LOC107569141
Sodium/potassium-transporting ATPase subunit alpha-1 isoform X1.
    
 
 0.707
LOC107552847
Small subunit ribosomal protein S9e.
   
 
 0.701
LOC107552847-2
40S ribosomal protein S9.
   
 
 0.701
bmp2
Bone morphogenetic protein 2.
    
 0.669
LOC107582046
INO80 complex subunit E-like isoform X1.
   
 
 0.640
LOC107586121
Secreted frizzled-related protein 1-like.
   
  
 0.634
LOC107553708
Secreted frizzled-related protein 1-like.
   
  
 0.634
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.