Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSSGRP00000001544Zinc finger, MYND-type containing 12. (342 aa)    
Predicted Functional Partners:
LOC107549965
Uncharacterized protein C1orf194 homolog.
   
 
 0.915
LOC107570642
RIB43A-like with coiled-coils protein 1.
  
 
 0.902
LOC107586532
RIB43A-like with coiled-coils protein 1.
  
 
 0.901
ENSSGRP00000109661
Cilia and flagella associated protein 57.
   
 
 0.892
Ttc29
Tetratricopeptide repeat protein 29.
   
 
 0.890
Cfap44
Cilia- and flagella-associated protein 44.
   
 
 0.882
ENSSGRP00000095978
Coiled-coil domain-containing protein 65-like.
    
 
 0.874
ENSSGRP00000112146
annotation not available
    
 
 0.874
LOC107573296
RIB43A-like with coiled-coils protein 2.
  
 
 0.866
ENSSGRP00000031812
Nucleoside diphosphate kinase 7-like.
    
 
 0.862
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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