Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001565annotation not available (140 aa)    
Predicted Functional Partners:
Ttc29
Tetratricopeptide repeat protein 29.
   
   0.941
efcab7
EF-hand calcium-binding domain-containing protein 7.
    
   0.905
LOC107600310
CAMP-dependent protein kinase catalytic subunit beta isoform X1.
    
 0.858
ENSSGRP00000018620
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b.
    
 0.858
LOC107599301
CAMP-dependent protein kinase catalytic subunit alpha-like.
    
 0.858
ENSSGRP00000041152
Protein kinase, cAMP-dependent, catalytic, beta a.
    
 0.858
LOC107602709
CAMP-dependent protein kinase catalytic subunit alpha isoform X1.
    
 0.858
ENSSGRP00000077225
CAMP-dependent protein kinase catalytic subunit alpha-like.
    
 0.858
LOC107562862
CAMP-dependent protein kinase catalytic subunit beta isoform X1.
    
 0.858
LOC107592581
CAMP-dependent protein kinase catalytic subunit alpha-like.
    
 0.858
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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