STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001588Golgi apparatus protein 1-like isoform X1. (889 aa)    
Predicted Functional Partners:
ENSSGRP00000021463
Protein FAM234B-like.
      
 0.652
plekhj1
Pleckstrin homology domain containing J1.
      
 0.632
LOC107559437
FAS-associated death domain protein-like.
      
 0.623
LOC107555747
Myc target protein 1 homolog.
      
 0.617
LOC107589680
Myc target protein 1 homolog.
      
 0.607
ENSSGRP00000097425
Myc target protein 1 homolog.
      
 0.607
ENSSGRP00000069338
Microfibril-associated glycoprotein 4-like.
      
 0.605
ENSSGRP00000005283
Selectin, platelet.
    
 0.596
ENSSGRP00000059103
annotation not available
    
 0.591
ENSSGRP00000059136
Selectin E.
    
 0.591
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.