Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001588Golgi apparatus protein 1-like isoform X1. (889 aa)    
Predicted Functional Partners:
ENSSGRP00000063992
Golgi apparatus protein 1-like.
     
  0.849
LOC107573092
Golgi apparatus protein 1-like.
     
  0.849
ENSSGRP00000005283
Selectin, platelet.
    
 0.811
ENSSGRP00000059103
annotation not available
    
 0.811
ENSSGRP00000059136
Selectin E.
    
 0.811
ENSSGRP00000073030
L-selectin-like isoform X1.
    
 0.811
ENSSGRP00000073037
annotation not available
    
 0.811
ENSSGRP00000021463
Protein FAM234B-like.
      
 0.757
plekhj1
Pleckstrin homology domain containing J1.
      
 0.745
LOC107559437
FAS-associated death domain protein-like.
      
 0.678
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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