Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
LOC107596028Delta-aminolevulinic acid dehydratase-like. (348 aa)    
Predicted Functional Partners:
LOC107597563
Porphobilinogen deaminase-like.
 
 0.987
ENSSGRP00000005026
Porphobilinogen deaminase-like.
 
 0.986
ENSSGRP00000016006
Hydroxymethylbilane synthase a.
 
 0.986
ENSSGRP00000077666
Hydroxymethylbilane synthase, b.
 
 0.986
ENSSGRP00000076975
Porphobilinogen deaminase-like.
 
 0.985
ENSSGRP00000010164
Uroporphyrinogen-III synthase-like.
  
 0.971
LOC107549233
5-aminolevulinate synthase, erythroid-specific, mitochondrial-like.
    
 0.971
Uros
Uroporphyrinogen-III synthase.
  
 0.971
ENSSGRP00000007476
5-aminolevulinate synthase, nonspecific, mitochondrial-like.
    
 0.938
alas1
5-aminolevulinate synthase, nonspecific, mitochondrial.
    
 0.938
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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