Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001601Ring finger protein 185. (141 aa)    
Predicted Functional Partners:
LOC107595682
Derlin-1-like.
    
 0.933
LOC107593655
Derlin-1.
    
 0.933
LOC107583749
Cystic fibrosis transmembrane conductance regulator-like.
    
 0.913
LOC107596947
Cystic fibrosis transmembrane conductance regulator-like.
    
 0.913
LOC107601865
Erlin-1.
   
 0.857
ENSSGRP00000040811
ER lipid raft associated 1.
   
 0.857
LOC107596165
Erlin-2.
   
 0.857
ENSSGRP00000086381
Erlin-2-like.
   
 0.857
LOC107599877
Transmembrane and ubiquitin-like domain-containing protein 1.
    
 
 0.856
LOC107557000
Transmembrane and ubiquitin-like domain-containing protein 1.
    
 
 0.856
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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