STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YTHDC2Probable ATP-dependent RNA helicase YTHDC2. (1302 aa)    
Predicted Functional Partners:
ENSSGRP00000012934
Intersectin 2a.
    
  0.969
ENSSGRP00000074134
Intersectin-2-like.
    
  0.969
ENSSGRP00000084141
Intersectin 2b.
    
  0.969
LOC107594821
Intersectin-2-like isoform X1.
    
  0.969
LOC107550069
Cleavage and polyadenylation specificity factor subunit 1-like.
   
 
 0.949
ENSSGRP00000027190
Pre-mRNA 3'-end-processing factor FIP1-like.
   
 
 0.925
ENSSGRP00000058361
Cleavage and polyadenylation specificity factor subunit 2-like.
   
 
 0.922
ENSSGRP00000098667
Cleavage and polyadenylation specific factor 2.
   
 
 0.922
ENSSGRP00000004521
annotation not available
   
 0.918
LOC107583845
Cleavage and polyadenylation specificity factor subunit 5-like.
   
 0.918
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.