STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107591617Cartilage-associated protein-like isoform X1. (396 aa)    
Predicted Functional Partners:
PPIB
Peptidyl-prolyl cis-trans isomerase B (cyclophilin B).
   
 0.837
LOC107560023
Peptidyl-prolyl cis-trans isomerase B (cyclophilin B).
   
 0.837
PPIC
Peptidyl-prolyl cis-trans isomerase C-like isoform X1.
   
 0.787
P3h1
Procollagen-proline 3-dioxygenase 1.
   
0.782
ENSSGRP00000078534
Procollagen-proline 3-dioxygenase 1.
   
0.782
p3h3
Procollagen-proline 3-dioxygenase 3.
   
0.742
ENSSGRP00000037467
annotation not available
   
0.742
LOC107564922
Procollagen-proline 3-dioxygenase 2.
   
0.742
ENSSGRP00000073923
Procollagen-proline 3-dioxygenase 2.
   
0.742
LOC107553316
Protein disulfide-isomerase-like.
   
 
 0.704
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.