Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107591618F-box and leucine-rich repeat protein 2/20. (432 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1 isoform X1.
    
 0.938
ENSSGRP00000016547
Cullin 1a.
    
 0.870
LOC107595130
Cullin-1-like.
    
 0.870
ENSSGRP00000073630
Cullin 1b.
    
 0.870
LOC107600214
Cullin-1-like.
    
 0.870
LOC107587501
Protein prenyltransferase alpha subunit repeat containing protein 1.
    
 
 0.803
LOC107567149
Protein prenyltransferase alpha subunit repeat-containing protein 1-like isoform X1.
    
 
 0.803
RABGGTB
Geranylgeranyl transferase type-2 subunit beta-like isoform X1.
    
 
 0.763
ENSSGRP00000005442
RING-box protein 1.
    
 0.759
rbx1
E3 ubiquitin-protein ligase RBX1.
    
 0.759
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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