STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001643E3 ubiquitin-protein ligase Zswim2-like. (596 aa)    
Predicted Functional Partners:
ENSSGRP00000083272
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.702
ENSSGRP00000106616
annotation not available
    
 0.702
ENSSGRP00000109659
EBNA1 binding protein 2.
      
 0.644
DLEC1
DLEC1 cilia and flagella associated protein.
    
 0.630
Lrrc34
Leucine-rich repeat-containing protein 34.
      
 0.625
LOC107584188
Radial spoke head 10 homolog B-like.
      
 0.620
LOC107597473
Mitochondria-eating protein-like.
      
 0.593
ENSSGRP00000080132
Coiled-coil domain containing 146.
    
 
 0.588
ENSSGRP00000081398
Coiled-coil domain-containing protein 146-like.
    
 
 0.588
ENSSGRP00000047356
Radial spoke head 14 homolog.
      
 0.587
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.