STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107562924Acid ceramidase-like. (361 aa)    
Predicted Functional Partners:
LOC107601172
Alkaline ceramidase 2 isoform X1.
     
 0.959
Asah2
Neutral ceramidase.
     
 0.959
LOC107585930
Alkaline ceramidase 1-like isoform X1.
     
 0.956
LOC107550428
Alkaline ceramidase 1.
     
 0.956
LOC107552834
Sphingosine kinase 2-like.
     
 0.951
ENSSGRP00000083973
Sphingosine kinase 2-like.
     
 0.951
ENSSGRP00000016540
Ceramide kinase-like.
     
 0.949
LOC107571455
Ceramide kinase-like.
     
 0.949
ENSSGRP00000047220
Sphingosine kinase 2-like.
     
 0.944
SPHK1
Sphingosine kinase 1.
     
 0.944
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.