Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107595990Taperin-like. (774 aa)    
Predicted Functional Partners:
ENSSGRP00000036307
Uncharacterized protein LOC107565749.
      
 0.582
ENSSGRP00000046117
Uncharacterized protein LOC107601973.
      
 0.582
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
      
 0.570
LOC107584521
POU domain, class 5, transcription factor 1.
      
 0.494
LOC107561540
Uncharacterized protein LOC107561540.
      
 0.459
LOC107594800
Uncharacterized protein LOC107594800.
      
 0.459
ENSSGRP00000052579
SAFB-like transcription modulator isoform X1.
      
 0.445
LOC107548455
Unconventional myosin-Ic isoform X1.
      
 0.439
LOC107596121
Unconventional myosin-Ic-like isoform X1.
      
 0.439
ENSSGRP00000067900
Myosin Ic, paralog b.
      
 0.439
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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