STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001665Si:dkey-74k8.4. (218 aa)    
Predicted Functional Partners:
l3hypdh
Trans-3-hydroxy-L-proline dehydratase isoform X1.
    
 0.899
iah1
Isoamyl acetate-hydrolyzing esterase 1 homolog.
    
 0.891
ENSSGRP00000025076
annotation not available
    
 0.866
gatb
Aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B.
    
 0.866
Gmps
GMP synthase (glutamine-hydrolysing).
  
 
  0.790
ENSSGRP00000050161
GMP synthase [glutamine-hydrolyzing]-like.
  
 
  0.790
LOC107556156
Amidophosphoribosyltransferase-like.
    
  0.758
ENSSGRP00000086941
Amidophosphoribosyltransferase-like.
    
  0.758
LOC107601944
Anaphase-promoting complex subunit 4 isoform X1.
    
   0.703
ENSSGRP00000076761
Anaphase-promoting complex subunit 4-like.
    
   0.703
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.