Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC107596029Sjoegren syndrome nuclear autoantigen 1-like. (115 aa)    
Predicted Functional Partners:
ENSSGRP00000045202
Proteasome 26S subunit, ATPase 5.
   
   0.841
ENSSGRP00000066810
Proteasome 26S subunit, ATPase 5.
   
   0.841
LOC107574929
Mitochondrial intermembrane space import and assembly protein 40.
    
   0.674
LOC107551797
Mitochondrial intermembrane space import and assembly protein 40-like.
    
   0.674
LOC107584188
Radial spoke head 10 homolog B-like.
      
 0.672
haus6
HAUS augmin-like complex subunit 6 isoform X1.
     
 0.665
LOC107593020
DNA-directed RNA polymerase II subunit GRINL1A-like.
    
   0.646
LOC107585982
DNA-directed RNA polymerase II subunit GRINL1A-like.
    
   0.646
abcf3
ATP-binding cassette, subfamily F, member 3.
      
 0.645
ENSSGRP00000050351
Cilia and flagella associated protein 70.
     
 0.634
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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