ENSSGRP00000001696 protein (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSSGRP00000001696

annotation not available (111 aa)

Predicted Functional Partners:

Mospd2

0.731

LOC107588983

0.684

LOC107562649

0.684

LOC107557781

0.684

LOC107602073

0.684

LOC107553159

0.684

LOC107557781-2

0.684

ENSSGRP00000001665

0.642

ENSSGRP00000005304

0.628

ENSSGRP00000097878

0.625

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000001665	ENSSGRP00000001696	ENSSGRP00000001665	ENSSGRP00000001696	Si:dkey-74k8.4.	annotation not available	0.642
ENSSGRP00000001665	ENSSGRP00000005304	ENSSGRP00000001665	ENSSGRP00000005304	Si:dkey-74k8.4.	Neurogenic locus notch homolog protein 1-like.	0.721
ENSSGRP00000001665	ENSSGRP00000097878	ENSSGRP00000001665	ENSSGRP00000097878	Si:dkey-74k8.4.	Proteasome 26S subunit, non-ATPase 10.	0.616
ENSSGRP00000001696	ENSSGRP00000001665	ENSSGRP00000001696	ENSSGRP00000001665	annotation not available	Si:dkey-74k8.4.	0.642
ENSSGRP00000001696	ENSSGRP00000005304	ENSSGRP00000001696	ENSSGRP00000005304	annotation not available	Neurogenic locus notch homolog protein 1-like.	0.628
ENSSGRP00000001696	ENSSGRP00000097878	ENSSGRP00000001696	ENSSGRP00000097878	annotation not available	Proteasome 26S subunit, non-ATPase 10.	0.625
ENSSGRP00000001696	LOC107553159	ENSSGRP00000001696	ENSSGRP00000090806	annotation not available	Ras-related protein Rab-7a-like.	0.684
ENSSGRP00000001696	LOC107557781	ENSSGRP00000001696	ENSSGRP00000067873	annotation not available	Ras-related protein Rab-7A.	0.684
ENSSGRP00000001696	LOC107557781-2	ENSSGRP00000001696	ENSSGRP00000106267	annotation not available	Ras-related protein Rab-7a.	0.684
ENSSGRP00000001696	LOC107562649	ENSSGRP00000001696	ENSSGRP00000061449	annotation not available	Ras-related protein Rab-7a-like.	0.684
ENSSGRP00000001696	LOC107588983	ENSSGRP00000001696	ENSSGRP00000036282	annotation not available	Ras-related protein Rab-7a-like.	0.684
ENSSGRP00000001696	LOC107602073	ENSSGRP00000001696	ENSSGRP00000080176	annotation not available	Ras-related protein Rab-7a-like isoform X1.	0.684
ENSSGRP00000001696	Mospd2	ENSSGRP00000001696	ENSSGRP00000051042	annotation not available	Motile sperm domain-containing protein 2.	0.731
ENSSGRP00000005304	ENSSGRP00000001665	ENSSGRP00000005304	ENSSGRP00000001665	Neurogenic locus notch homolog protein 1-like.	Si:dkey-74k8.4.	0.721
ENSSGRP00000005304	ENSSGRP00000001696	ENSSGRP00000005304	ENSSGRP00000001696	Neurogenic locus notch homolog protein 1-like.	annotation not available	0.628
ENSSGRP00000005304	ENSSGRP00000097878	ENSSGRP00000005304	ENSSGRP00000097878	Neurogenic locus notch homolog protein 1-like.	Proteasome 26S subunit, non-ATPase 10.	0.722
ENSSGRP00000097878	ENSSGRP00000001665	ENSSGRP00000097878	ENSSGRP00000001665	Proteasome 26S subunit, non-ATPase 10.	Si:dkey-74k8.4.	0.616
ENSSGRP00000097878	ENSSGRP00000001696	ENSSGRP00000097878	ENSSGRP00000001696	Proteasome 26S subunit, non-ATPase 10.	annotation not available	0.625
ENSSGRP00000097878	ENSSGRP00000005304	ENSSGRP00000097878	ENSSGRP00000005304	Proteasome 26S subunit, non-ATPase 10.	Neurogenic locus notch homolog protein 1-like.	0.722
LOC107553159	ENSSGRP00000001696	ENSSGRP00000090806	ENSSGRP00000001696	Ras-related protein Rab-7a-like.	annotation not available	0.684