Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENSSGRP00000001710RNA 3'-terminal phosphate cyclase (ATP). (334 aa)    
Predicted Functional Partners:
utp18
U3 small nucleolar RNA-associated protein 18 homolog.
   
 0.973
ENSSGRP00000034240
BMS1 ribosome biogenesis factor.
   
 0.963
Bms1
Ribosome biogenesis protein BMS1 homolog.
   
 0.963
imp3
U3 small nucleolar ribonucleoprotein protein IMP3.
   
 0.962
tbl3
U3 small nucleolar RNA-associated protein 13.
   
 
 0.951
LOC107583586
U3 small nucleolar RNA-associated protein 5.
   
 0.950
LOC107583058
U3 small nucleolar RNA-associated protein 5.
   
 0.950
ENSSGRP00000013069
UTP3 small subunit processome component.
   
 
 0.948
LOC107553989
U3 small nucleolar RNA-associated protein 4 homolog.
   
 0.944
LOC107583899
U3 small nucleolar RNA-associated protein 4 homolog.
   
 0.944
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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