STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107587315Vesicle-associated membrane protein 8-like. (124 aa)    
Predicted Functional Partners:
ENSSGRP00000083958
Syntaxin-17-like.
   
 0.998
ENSSGRP00000101658
Syntaxin-17-like.
   
 0.998
LOC107560055
Synaptosomal-associated protein 29-like.
   
 0.997
LOC107559592
Synaptosomal-associated protein 29-like.
   
 0.997
VTI1A
Vesicle transport through interaction with t-SNAREs homolog 1A-like.
   
 0.991
LOC107566351
Vesicle transport through interaction with t-SNAREs homolog 1A-like isoform X1.
   
 0.991
ENSSGRP00000008659
Bet1 golgi vesicular membrane trafficking protein.
    
 
 0.984
bet1
Blocked early in transport 1.
    
 
 0.984
LOC107569362
Syntaxin-8-like isoform X1.
    
 0.968
LOC107555374
Syntaxin-8-like.
    
 0.968
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.