Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107587467Vesicle-associated membrane protein 5-like. (112 aa)    
Predicted Functional Partners:
LOC107596789
Syntaxin-16-like isoform X1.
    
 0.947
LOC107554194
Syntaxin-16-like.
    
 0.947
LOC107569362
Syntaxin-8-like isoform X1.
    
 0.902
LOC107555374
Syntaxin-8-like.
    
 0.902
ENSSGRP00000040049
Synaptosomal-associated protein 23-like isoform X1.
   
 0.889
LOC107592806
Synaptosomal-associated protein 23-like isoform X1.
   
 0.889
ENSSGRP00000083879
Synaptosome associated protein 23.2.
   
 0.889
LOC107594774
Synaptosomal-associated protein 23-like.
   
 0.889
LOC107560055
Synaptosomal-associated protein 29-like.
   
 0.887
LOC107559592
Synaptosomal-associated protein 29-like.
   
 0.887
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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