Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001741Leukotriene B4 receptor 1-like. (295 aa)    
Predicted Functional Partners:
LOC107597158
C-C motif chemokine 17-like isoform X1.
     
  0.762
LOC107553533
C-C motif chemokine 17-like isoform X1.
     
  0.762
LOC107564158
Leukotriene B4 receptor 1-like.
     
  0.620
LOC107566604
Leukotriene B4 receptor 1-like.
     
  0.620
LOC107598263
Neuropeptide FF receptor 2-like.
      
 0.582
ENSSGRP00000054434
Ras-like protein family member 10B.
     
 0.573
LOC107592305
Ras-like protein family member 10B.
     
 0.573
LOC107597750
Phylloquinone omega-hydroxylase CYP4F2-like.
      
 0.547
ENSSGRP00000015351
Guanine nucleotide-binding protein subunit alpha-14-like.
    
  0.540
pdzd3
LOW QUALITY PROTEIN: Na(+)/H(+) exchange regulatory cofactor NHE-RF4.
    
 
 0.528
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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