STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001750RNA/RNP complex-1-interacting phosphatase-like. (262 aa)    
Predicted Functional Partners:
LOC107586261
Transcription elongation factor SPT5-like isoform X1.
    
 0.907
LOC107597543
Transcription elongation factor SPT5 isoform X1.
    
 0.907
ENSSGRP00000043358
MRNA cap guanine-N7 methyltransferase-like.
   
 0.820
LOC107566559
MRNA cap guanine-N7 methyltransferase-like.
   
 0.820
polr2d
DNA-directed RNA polymerase II subunit RPB4.
    
 0.802
ncbp2
Nuclear cap-binding protein subunit 2.
   
 
 0.801
LOC107569251
Nuclear cap-binding protein subunit 2-like.
   
 
 0.801
ENSSGRP00000004141
annotation not available
   
 0.776
POLR2C
DNA-directed RNA polymerase II subunit RPB3-like.
   
 0.776
ENSSGRP00000035273
DNA-directed RNA polymerase II subunit RPB7-like.
    
 0.746
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.