Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001753Tripartite motif-containing protein 47-like. (417 aa)    
Predicted Functional Partners:
ENSSGRP00000038834
annotation not available
      
 0.713
LOC107599260
Protein SOGA3-like isoform X1.
      
 0.713
ENSSGRP00000046347
DnaJ homolog subfamily B member 5-like.
      
 0.574
ENSSGRP00000107716
annotation not available
      
 0.574
ENSSGRP00000038833
Protein SOGA3-like.
      
 0.505
LOC107559037
Protein SOGA3-like isoform X1.
      
 0.505
ENSSGRP00000088177
annotation not available
      
 0.505
LOC107574438
Early growth response protein 1-B-like.
    
 0.451
LOC107570202
Early growth response protein 1-B-like.
    
 0.451
ENSSGRP00000038274
annotation not available
   
  0.412
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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