STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankrd1Ankyrin repeat domain-containing protein 1. (319 aa)    
Predicted Functional Partners:
LOC107564187
Ankyrin repeat and SOCS box protein 12-like.
  
 
  0.592
ENSSGRP00000047663
Intraflagellar transport protein 81 homolog.
    
 0.588
ift52
Intraflagellar transport protein 52 homolog.
    
 0.552
ENSSGRP00000012941
Connective tissue growth factor-like.
   
 
 0.537
LOC107556147
Connective tissue growth factor-like.
   
 
 0.537
ENSSGRP00000005828
Ankyrin repeat and SOCS box protein 1-like.
  
 
  0.528
armc7
Armadillo repeat-containing protein 7.
      
 0.527
ENSSGRP00000040388
annotation not available
    
 
 0.526
LOC107570245
Insulin-like growth factor-binding protein 10.
    
 
 0.526
ENSSGRP00000093411
annotation not available
  
   
 0.526
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.