Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ankrd1Ankyrin repeat domain-containing protein 1. (319 aa)    
Predicted Functional Partners:
ENSSGRP00000078107
Ankyrin repeat domain-containing protein 2-like.
   
 
  0.909
LOC107584237
Ankyrin repeat domain-containing protein 1-like.
     
  0.878
acaa2
3-ketoacyl-CoA thiolase, mitochondrial.
    
 
 0.692
ENSSGRP00000012941
Connective tissue growth factor-like.
   
  
 0.690
LOC107556147
Connective tissue growth factor-like.
   
  
 0.690
LOC107602452
Natriuretic peptides A-like.
   
 
 0.662
LOC107595801
Natriuretic peptides A-like.
   
 
 0.662
ENSSGRP00000030630
BRCA1-associated RING domain protein 1-like.
    
  0.641
ENSSGRP00000091406
annotation not available
    
  0.641
ENSSGRP00000005304
Neurogenic locus notch homolog protein 1-like.
  
 
0.633
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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