STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107585799Protein lin-37 homolog. (236 aa)    
Predicted Functional Partners:
LOC107561548
Protein lin-52 homolog.
    
 0.998
lin9
Protein lin-9 homolog.
    
 0.998
ENSSGRP00000020964
Protein lin-54 homolog.
    
 0.995
Lin54
Protein lin-54 homolog.
    
 0.995
LOC107584269
Histone-binding protein RBBP4.
    
 0.995
LOC107562083
Histone-binding protein RBBP4.
    
 0.995
ENSSGRP00000066257
Uncharacterized protein LOC107581819.
    
 0.995
LOC107602791
Histone-binding protein RBBP7-like isoform X1.
    
 0.995
mybl2
Myb-related protein B.
   
 0.989
ENSSGRP00000078574
Lin-9 DREAM MuvB core complex component.
    
 0.988
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.