Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107585799Protein lin-37 homolog. (236 aa)    
Predicted Functional Partners:
LOC107561548
Protein lin-52 homolog.
    
 0.992
lin9
Protein lin-9 homolog.
    
 0.992
ENSSGRP00000078574
Lin-9 DREAM MuvB core complex component.
    
 0.992
LOC107594798
Protein lin-52 homolog.
    
 0.992
mybl2
Myb-related protein B.
    
 0.988
ENSSGRP00000080351
V-myb avian myeloblastosis viral oncogene homolog-like 2b.
    
 0.988
ENSSGRP00000051471
V-myb avian myeloblastosis viral oncogene homolog-like 2a.
    
 0.986
ENSSGRP00000020964
Protein lin-54 homolog.
    
 0.981
Lin54
Protein lin-54 homolog.
    
 0.981
ENSSGRP00000066257
Uncharacterized protein LOC107581819.
    
 0.981
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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