STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107572262T-cell acute lymphocytic leukemia protein 2-like. (109 aa)    
Predicted Functional Partners:
LOC107554475
Rhombotin-2.
    
 0.646
LOC107554555
Rhombotin-2-like.
    
 0.646
ENSSGRP00000060669
CCR4-NOT transcription complex subunit 11-like.
      
 0.607
cnot11
CCR4-NOT transcription complex subunit 11.
      
 0.607
helt
Hairy and enhancer of split-related protein HELT.
   
 
 0.601
HELT
Hairy and enhancer of split-related protein helt-like.
   
 
 0.601
ska1
Spindle and kinetochore-associated protein 1.
   
  
 0.596
LOC107552693
Transcription factor E2-alpha-like isoform X1.
    
 0.561
ENSSGRP00000028725
annotation not available
    
 0.561
ENSSGRP00000031275
Transcription factor 12.
    
 0.561
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.