Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001805Probable G-protein coupled receptor 88. (225 aa)    
Predicted Functional Partners:
ENSSGRP00000004434
Probable G-protein coupled receptor 160.
      
 0.603
Vcam1
Vascular cell adhesion protein 1.
     
 0.603
ENSSGRP00000064181
Probable G-protein coupled receptor 160.
      
 0.603
LOC107602942
Probable G-protein coupled receptor 75.
      
 0.598
LOC107553188
Probable G-protein coupled receptor 75.
      
 0.598
ENSSGRP00000002588
Diphthine methyl ester synthase-like.
      
 0.590
dph5
Diphthine methyl ester synthase.
      
 0.590
ENSSGRP00000100063
Wu:fj05g07.
     
 0.565
LOC107566229
Proenkephalin B (prodynorphin).
    
 0.554
ENSSGRP00000111113
Proenkephalin B (prodynorphin).
    
 0.554
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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