STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107591095Agrin-like isoform X1. (2037 aa)    
Predicted Functional Partners:
LOC107592827
Dystroglycan-like.
   
 0.988
LOC107564392
Dystroglycan-like.
   
 0.988
ENSSGRP00000027081
Agrin-like.
  
  
 
0.900
ENSSGRP00000059426
Low-density lipoprotein receptor-related protein 4-like.
    
 0.879
ENSSGRP00000063375
Low-density lipoprotein receptor-related protein 4-like.
    
 0.879
ENSSGRP00000001784
Low-density lipoprotein receptor related-protein 13.
    
 0.782
ENSSGRP00000011781
Low density lipoprotein receptor-related protein 2a.
    
 0.782
ENSSGRP00000028295
Low density lipoprotein receptor-related protein 2b.
    
 0.782
ENSSGRP00000032739
Si:dkey-88l16.3.
    
 0.782
ENSSGRP00000039188
Low-density lipoprotein receptor-related protein 2-like.
    
 0.782
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.