LOC107553481 protein (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC107553481

Pantothenate kinase 3 isoform X1. (439 aa)

Predicted Functional Partners:

ENSSGRP00000018774

0.964

coasy

0.964

LOC107551114

0.963

LOC107583771

0.963

LOC107565714

0.963

LOC107597001

0.963

ENSSGRP00000093284

0.900

ENSSGRP00000067063

0.566

LOC107572180

0.565

LOC107597116

0.557

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000018774	ENSSGRP00000067063	ENSSGRP00000018774	ENSSGRP00000067063	Phosphopantetheine adenylyltransferase / dephospho-CoA kinase.	Coiled-coil domain-containing protein 30-like.	0.989
ENSSGRP00000018774	ENSSGRP00000093284	ENSSGRP00000018774	ENSSGRP00000093284	Phosphopantetheine adenylyltransferase / dephospho-CoA kinase.	Ectonucleotide pyrophosphatase/phosphodiesterase family member 1-like.	0.900
ENSSGRP00000018774	LOC107551114	ENSSGRP00000018774	ENSSGRP00000013067	Phosphopantetheine adenylyltransferase / dephospho-CoA kinase.	Phosphopantothenate---cysteine ligase (ATP).	0.989
ENSSGRP00000018774	LOC107553481	ENSSGRP00000018774	ENSSGRP00000001832	Phosphopantetheine adenylyltransferase / dephospho-CoA kinase.	Pantothenate kinase 3 isoform X1.	0.964
ENSSGRP00000018774	LOC107565714	ENSSGRP00000018774	ENSSGRP00000108091	Phosphopantetheine adenylyltransferase / dephospho-CoA kinase.	Phosphopantothenate---cysteine ligase (ATP).	0.989
ENSSGRP00000018774	LOC107572180	ENSSGRP00000018774	ENSSGRP00000063596	Phosphopantetheine adenylyltransferase / dephospho-CoA kinase.	Cytochrome c oxidase assembly protein subunit 19.	0.991
ENSSGRP00000018774	LOC107583771	ENSSGRP00000018774	ENSSGRP00000057196	Phosphopantetheine adenylyltransferase / dephospho-CoA kinase.	Phosphopantothenoylcysteine decarboxylase-like.	0.999
ENSSGRP00000018774	LOC107597001	ENSSGRP00000018774	ENSSGRP00000109290	Phosphopantetheine adenylyltransferase / dephospho-CoA kinase.	Phosphopantothenoylcysteine decarboxylase-like.	0.999
ENSSGRP00000018774	coasy	ENSSGRP00000018774	ENSSGRP00000096424	Phosphopantetheine adenylyltransferase / dephospho-CoA kinase.	Phosphopantetheine adenylyltransferase / dephospho-CoA kinase.	0.999
ENSSGRP00000067063	ENSSGRP00000018774	ENSSGRP00000067063	ENSSGRP00000018774	Coiled-coil domain-containing protein 30-like.	Phosphopantetheine adenylyltransferase / dephospho-CoA kinase.	0.989
ENSSGRP00000067063	LOC107553481	ENSSGRP00000067063	ENSSGRP00000001832	Coiled-coil domain-containing protein 30-like.	Pantothenate kinase 3 isoform X1.	0.566
ENSSGRP00000067063	LOC107572180	ENSSGRP00000067063	ENSSGRP00000063596	Coiled-coil domain-containing protein 30-like.	Cytochrome c oxidase assembly protein subunit 19.	0.887
ENSSGRP00000067063	LOC107583771	ENSSGRP00000067063	ENSSGRP00000057196	Coiled-coil domain-containing protein 30-like.	Phosphopantothenoylcysteine decarboxylase-like.	0.907
ENSSGRP00000067063	LOC107597001	ENSSGRP00000067063	ENSSGRP00000109290	Coiled-coil domain-containing protein 30-like.	Phosphopantothenoylcysteine decarboxylase-like.	0.907
ENSSGRP00000067063	coasy	ENSSGRP00000067063	ENSSGRP00000096424	Coiled-coil domain-containing protein 30-like.	Phosphopantetheine adenylyltransferase / dephospho-CoA kinase.	0.989
ENSSGRP00000093284	ENSSGRP00000018774	ENSSGRP00000093284	ENSSGRP00000018774	Ectonucleotide pyrophosphatase/phosphodiesterase family member 1-like.	Phosphopantetheine adenylyltransferase / dephospho-CoA kinase.	0.900
ENSSGRP00000093284	LOC107553481	ENSSGRP00000093284	ENSSGRP00000001832	Ectonucleotide pyrophosphatase/phosphodiesterase family member 1-like.	Pantothenate kinase 3 isoform X1.	0.900
ENSSGRP00000093284	LOC107583771	ENSSGRP00000093284	ENSSGRP00000057196	Ectonucleotide pyrophosphatase/phosphodiesterase family member 1-like.	Phosphopantothenoylcysteine decarboxylase-like.	0.900
ENSSGRP00000093284	LOC107597001	ENSSGRP00000093284	ENSSGRP00000109290	Ectonucleotide pyrophosphatase/phosphodiesterase family member 1-like.	Phosphopantothenoylcysteine decarboxylase-like.	0.900
ENSSGRP00000093284	coasy	ENSSGRP00000093284	ENSSGRP00000096424	Ectonucleotide pyrophosphatase/phosphodiesterase family member 1-like.	Phosphopantetheine adenylyltransferase / dephospho-CoA kinase.	0.900