Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSSGRP00000001844C-type lectin domain containing 19A. (134 aa)    
Predicted Functional Partners:
LOC107588967
Arrestin domain-containing protein 3-like.
      
 0.574
LOC107602085
Arrestin domain-containing protein 3-like.
      
 0.574
LOC107585232
Uncharacterized protein C4orf32 homolog.
    
 
 0.572
LOC107556922
Uncharacterized protein C4orf32 homolog.
    
 
 0.572
gse1
Genetic suppressor element 1 isoform X1.
    
 0.529
ENSSGRP00000037571
Peter pan homolog.
   
  
 0.511
ENSSGRP00000001871
Tenascin C.
   
  0.491
ENSSGRP00000009821
Zmp:0000000846.
   
  0.491
ENSSGRP00000010979
Tenascin C.
   
  0.491
tnr
Tenascin-R isoform X1.
   
  0.491
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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