STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001847Kinesin family member 16Ba. (1196 aa)    
Predicted Functional Partners:
LOC107553890
RAD50-interacting protein 1-like.
   
 
  0.628
LOC107590313
RAD50-interacting protein 1-like.
   
 
  0.628
ENSSGRP00000053014
Unconventional SNARE in the endoplasmic reticulum protein 1.
     
 0.625
ENSSGRP00000072071
Unconventional SNARE in the endoplasmic reticulum protein 1.
     
 0.625
ENSSGRP00000073231
Isthmin-2-like.
      
 0.612
LOC107588748
Chromosome-associated kinesin KIF4-like.
     
0.530
ENSSGRP00000053942
Kinesin family member 21B.
     
0.523
ENSSGRP00000102906
Kinesin family member 21B.
     
0.523
ENSSGRP00000074172
Sorting nexin 20.
      
 0.517
LOC107581914
Vesicle transport protein SEC20-like.
     
 0.516
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.