Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSSGRP00000001847Kinesin family member 16Ba. (1196 aa)    
Predicted Functional Partners:
ENSSGRP00000040141
Uncharacterized protein LOC107600573.
     
  0.912
ENSSGRP00000049441
StAR-related lipid transfer protein 9-like.
   
 
  0.669
ENSSGRP00000049442
StAR-related lipid transfer protein 9-like.
   
 
  0.669
ENSSGRP00000073231
Isthmin-2-like.
      
 0.649
LOC107554064
Uncharacterized protein LOC107554064.
     
 0.626
LOC107584079
Uncharacterized protein LOC107584079 isoform X1.
     
 0.626
ENSSGRP00000074172
Sorting nexin 20.
      
 0.615
snx16
Sorting nexin-16 isoform X1.
      
 0.614
LOC107551528
Sorting nexin-21-like.
      
 0.594
ENSSGRP00000071580
Sorting nexin family member 21.
      
 0.594
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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