ENSSGRP00000001853 protein (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSSGRP00000001853

LOW QUALITY PROTEIN: inositol 1,4,5-trisphosphate receptor-interacting protein-like 2. (491 aa)

Predicted Functional Partners:

ENSSGRP00000081414

0.920

ENSSGRP00000008149

0.878

LOC107572171

0.878

ENSSGRP00000029824

0.863

coq4

0.863

LOC107559892

0.791

LOC107586847

0.791

Adck4

0.779

ENSSGRP00000093794

0.779

ENSSGRP00000099804

0.779

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Adck4	ENSSGRP00000001853	ENSSGRP00000070070	ENSSGRP00000001853	AarF domain-containing protein kinase 4.	LOW QUALITY PROTEIN: inositol 1,4,5-trisphosphate receptor-interacting protein-like 2.	0.779
Adck4	ENSSGRP00000008149	ENSSGRP00000070070	ENSSGRP00000008149	AarF domain-containing protein kinase 4.	Ubiquinone biosynthesis protein COQ9, mitochondrial-like.	0.980
Adck4	ENSSGRP00000029824	ENSSGRP00000070070	ENSSGRP00000029824	AarF domain-containing protein kinase 4.	Uncharacterized protein LOC107575046.	0.848
Adck4	ENSSGRP00000081414	ENSSGRP00000070070	ENSSGRP00000081414	AarF domain-containing protein kinase 4.	Coenzyme Q3 methyltransferase.	0.975
Adck4	LOC107559892	ENSSGRP00000070070	ENSSGRP00000045673	AarF domain-containing protein kinase 4.	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial-like.	0.984
Adck4	LOC107572171	ENSSGRP00000070070	ENSSGRP00000062633	AarF domain-containing protein kinase 4.	Ubiquinone biosynthesis protein COQ9, mitochondrial-like.	0.980
Adck4	LOC107586847	ENSSGRP00000070070	ENSSGRP00000047502	AarF domain-containing protein kinase 4.	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial isoform X1.	0.984
Adck4	coq4	ENSSGRP00000070070	ENSSGRP00000110601	AarF domain-containing protein kinase 4.	Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial.	0.848
ENSSGRP00000001853	Adck4	ENSSGRP00000001853	ENSSGRP00000070070	LOW QUALITY PROTEIN: inositol 1,4,5-trisphosphate receptor-interacting protein-like 2.	AarF domain-containing protein kinase 4.	0.779
ENSSGRP00000001853	ENSSGRP00000008149	ENSSGRP00000001853	ENSSGRP00000008149	LOW QUALITY PROTEIN: inositol 1,4,5-trisphosphate receptor-interacting protein-like 2.	Ubiquinone biosynthesis protein COQ9, mitochondrial-like.	0.878
ENSSGRP00000001853	ENSSGRP00000029824	ENSSGRP00000001853	ENSSGRP00000029824	LOW QUALITY PROTEIN: inositol 1,4,5-trisphosphate receptor-interacting protein-like 2.	Uncharacterized protein LOC107575046.	0.863
ENSSGRP00000001853	ENSSGRP00000081414	ENSSGRP00000001853	ENSSGRP00000081414	LOW QUALITY PROTEIN: inositol 1,4,5-trisphosphate receptor-interacting protein-like 2.	Coenzyme Q3 methyltransferase.	0.920
ENSSGRP00000001853	ENSSGRP00000093794	ENSSGRP00000001853	ENSSGRP00000093794	LOW QUALITY PROTEIN: inositol 1,4,5-trisphosphate receptor-interacting protein-like 2.	Atypical kinase ADCK3, mitochondrial-like.	0.779
ENSSGRP00000001853	ENSSGRP00000099804	ENSSGRP00000001853	ENSSGRP00000099804	LOW QUALITY PROTEIN: inositol 1,4,5-trisphosphate receptor-interacting protein-like 2.	Atypical kinase ADCK3, mitochondrial.	0.779
ENSSGRP00000001853	LOC107559892	ENSSGRP00000001853	ENSSGRP00000045673	LOW QUALITY PROTEIN: inositol 1,4,5-trisphosphate receptor-interacting protein-like 2.	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial-like.	0.791
ENSSGRP00000001853	LOC107572171	ENSSGRP00000001853	ENSSGRP00000062633	LOW QUALITY PROTEIN: inositol 1,4,5-trisphosphate receptor-interacting protein-like 2.	Ubiquinone biosynthesis protein COQ9, mitochondrial-like.	0.878
ENSSGRP00000001853	LOC107586847	ENSSGRP00000001853	ENSSGRP00000047502	LOW QUALITY PROTEIN: inositol 1,4,5-trisphosphate receptor-interacting protein-like 2.	Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial isoform X1.	0.791
ENSSGRP00000001853	coq4	ENSSGRP00000001853	ENSSGRP00000110601	LOW QUALITY PROTEIN: inositol 1,4,5-trisphosphate receptor-interacting protein-like 2.	Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial.	0.863
ENSSGRP00000008149	Adck4	ENSSGRP00000008149	ENSSGRP00000070070	Ubiquinone biosynthesis protein COQ9, mitochondrial-like.	AarF domain-containing protein kinase 4.	0.980
ENSSGRP00000008149	ENSSGRP00000001853	ENSSGRP00000008149	ENSSGRP00000001853	Ubiquinone biosynthesis protein COQ9, mitochondrial-like.	LOW QUALITY PROTEIN: inositol 1,4,5-trisphosphate receptor-interacting protein-like 2.	0.878