STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107594415NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5. (332 aa)    
Predicted Functional Partners:
ndufaf3
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3.
    
 0.997
ENSSGRP00000005707
annotation not available
    
 0.964
LOC107597168
NADH-quinone oxidoreductase subunit B-like isoform X1.
    
 0.964
ENSSGRP00000084168
NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial.
    
 0.964
LOC107553547
NADH dehydrogenase (ubiquinone) Fe-S protein 7.
    
 0.964
ndufaf7
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7.
   
 
 0.938
ND1
NADH-ubiquinone oxidoreductase chain 1.
     
 0.923
ENSSGRP00000010022
NADH:ubiquinone oxidoreductase complex assembly factor 6.
   
 0.915
ENSSGRP00000039098
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6.
   
 0.915
LOC107588839
Complex I assembly factor TIMMDC1, mitochondrial-like isoform X1.
     
 0.905
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.