Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107564021Coiled-coil domain-containing protein 43-like. (213 aa)    
Predicted Functional Partners:
LOC107561379
Bifunctional polynucleotide phosphatase/kinase-like.
    
   0.785
ENSSGRP00000070164
Bifunctional polynucleotide phosphatase/kinase-like.
    
   0.785
clrn3
Clarin-3.
    
   0.706
LOC107549339
Clarin-3-like.
    
   0.706
ENSSGRP00000090450
Coiled-coil domain-containing protein 87-like isoform X1.
      
 0.627
LOC107596601
WASH complex subunit CCDC53-like.
      
 0.595
LOC107590199
WASH complex subunit CCDC53.
      
 0.595
ENSSGRP00000095476
WASH complex subunit strumpellin-like.
      
 0.575
washc5
WASH complex subunit strumpellin.
      
 0.575
ENSSGRP00000085295
Golgi SNAP receptor complex member 2-like.
      
 0.557
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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