STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001860Meiosis-specific coiled-coil domain-containing protein MEIOC-like. (237 aa)    
Predicted Functional Partners:
YTHDC2
Probable ATP-dependent RNA helicase YTHDC2.
    
 
 0.686
ENSSGRP00000018020
annotation not available
    
 
 0.686
SYDE1
Synapse defective Rho GTPase homolog 1.
      
 0.623
ENSSGRP00000067277
Rho GTPase-activating protein SYDE2-like.
      
 0.623
ENSSGRP00000020710
Meiotic recombination protein REC8, animal type.
     
 0.548
ENSSGRP00000110169
REC8 meiotic recombination protein b.
     
 0.548
LOC107564298
Probable RNA-binding protein 46.
      
 0.508
LOC107590774
Probable RNA-binding protein 46 isoform X1.
      
 0.508
ENSSGRP00000014815
Nucleolus and neural progenitor protein.
      
 0.483
LOC107567640
Protein nepro homolog isoform X1.
      
 0.483
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.