STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107594463BTB/POZ domain-containing protein 3-like. (462 aa)    
Predicted Functional Partners:
LOC107589327
COP9 signalosome complex subunit 2.
   
  0.681
ENSSGRP00000040141
Uncharacterized protein LOC107600573.
   
  
 0.653
ENSSGRP00000073231
Isthmin-2-like.
      
 0.652
COPS6
COP9 signalosome complex subunit 6.
    
  0.634
ENSSGRP00000016466
COP9 signalosome subunit 3.
    
  0.628
cops3
COP9 signalosome complex subunit 3.
    
  0.628
LOC107573626
Cullin-3-B-like.
   
 0.613
LOC107551306
Cullin 3.
   
 0.613
ENSSGRP00000060541
Cullin-3-like.
   
 0.613
LOC107567698
Cullin-3-B-like isoform X1.
   
 0.613
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.