Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSSGRP00000001888TRAF-type zinc finger domain-containing protein 1-like. (556 aa)    
Predicted Functional Partners:
LOC107601260
E3 ubiquitin-protein ligase TRAF7 isoform X1.
   
 0.673
LOC107590399
E3 ubiquitin-protein ligase TRAF7-like.
   
 0.673
Heatr5b
HEAT repeat-containing protein 5B.
      
 0.665
LOC107560257
Transmembrane 9 superfamily member 1-like.
    
  0.637
LOC107589974
Transmembrane 9 superfamily member 1-like.
    
  0.637
ENSSGRP00000049118
Protein FAM98B-like.
    
 0.608
ENSSGRP00000038462
Checkpoint kinase 2.
    
 
 0.597
ENSSGRP00000079966
Checkpoint kinase 2.
    
 
 0.597
ENSSGRP00000001831
Cyclin-G-associated kinase-like isoform X1.
    
 0.569
gak
Cyclin-G-associated kinase isoform X1.
    
 0.569
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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