STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001888TRAF-type zinc finger domain-containing protein 1-like. (556 aa)    
Predicted Functional Partners:
LOC107572061
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.658
ENSSGRP00000083184
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.569
Mib2
E3 ubiquitin-protein ligase MIB2 isoform X1.
    
 0.569
LOC107597410
Rabankyrin-5-like.
    
 0.541
ENSSGRP00000038462
Checkpoint kinase 2.
    
 
 0.537
ENSSGRP00000079966
Checkpoint kinase 2.
    
 
 0.537
ENSSGRP00000012934
Intersectin 2a.
   
 0.520
ENSSGRP00000074134
Intersectin-2-like.
   
 0.520
ENSSGRP00000084141
Intersectin 2b.
   
 0.520
LOC107594821
Intersectin-2-like isoform X1.
   
 0.520
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.