STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107591147Uncharacterized protein LOC107591147. (543 aa)    
Predicted Functional Partners:
ENSSGRP00000030877
Tetratricopeptide repeat domain 16.
    
 0.683
ndufaf7
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7.
      
 0.625
mdh1b
Putative malate dehydrogenase 1B.
    
 
 0.528
ENSSGRP00000093075
Malate dehydrogenase 1B, NAD (soluble).
    
 
 0.528
LOC107583485
Stonin-2-like isoform X1.
      
 0.493
LOC107588275
Stonin-2-like isoform X1.
      
 0.493
ndufb5
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial.
      
 0.489
LOC107569675
Histone-lysine N-methyltransferase SMYD1-like isoform X1.
   
 0.486
ENSSGRP00000034836
RING finger protein 223-like.
   
 0.471
ENSSGRP00000028677
YME1-like 1a.
    
 
 0.465
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.