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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001899Histone-lysine N-methyltransferase SETD1B-A-like isoform X1. (1864 aa)    
Predicted Functional Partners:
Rbbp5
Retinoblastoma-binding protein 5.
    
 0.978
ENSSGRP00000017506
annotation not available
    
 0.940
ash2l
Set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X1.
    
 0.940
ENSSGRP00000052694
Set1/Ash2 histone methyltransferase complex subunit ASH2-like.
    
 0.940
LOC107594419
Protein dpy-30 homolog isoform X1.
    
 0.877
dpy30
Protein dpy-30 homolog isoform X1.
    
 0.877
ENSSGRP00000055874
COMPASS component SWD2.
   
 
 0.858
LOC107584451
WD repeat-containing protein 82.
   
 
 0.858
LOC107577056
CXXC-type zinc finger protein 1-like.
   
 
 0.790
LOC107598432
CXXC-type zinc finger protein 1-like.
   
 
 0.790
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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