Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107602349Protein sel-1 homolog 1-like. (776 aa)    
Predicted Functional Partners:
Aup1
Ancient ubiquitous protein 1.
   
 
 0.976
LOC107595682
Derlin-1-like.
   
 0.974
LOC107593655
Derlin-1.
   
 0.974
ENSSGRP00000006176
annotation not available
   
 0.969
ENSSGRP00000080931
Derlin 2.
   
 0.969
LOC107582707
Protein OS-9-like isoform X1.
   
 0.967
LOC107585136
Protein OS-9-like.
   
 0.967
Derl2
Derlin-2/3.
   
 0.963
LOC107600006
Derlin-2-like.
   
 0.962
LOC107602852
Derlin-2-like.
   
 0.962
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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