ENSSGRP00000001925 protein (Sinocyclocheilus grahami)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSSGRP00000001925

Prefoldin subunit 1-like. (71 aa)

Predicted Functional Partners:

ENSSGRP00000005412

0.996

pfdn6

0.996

Pfdn5

0.995

PFDN4

0.994

pfdn4

0.994

ENSSGRP00000007037

0.993

LOC107588140

0.992

LOC107562614

0.992

pfdn2

0.990

ENSSGRP00000086148

0.990

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000001925	ENSSGRP00000005412	ENSSGRP00000001925	ENSSGRP00000005412	Prefoldin subunit 1-like.	annotation not available	0.996
ENSSGRP00000001925	ENSSGRP00000007037	ENSSGRP00000001925	ENSSGRP00000007037	Prefoldin subunit 1-like.	annotation not available	0.993
ENSSGRP00000001925	ENSSGRP00000086148	ENSSGRP00000001925	ENSSGRP00000086148	Prefoldin subunit 1-like.	Prefoldin subunit 2.	0.990
ENSSGRP00000001925	LOC107562614	ENSSGRP00000001925	ENSSGRP00000094204	Prefoldin subunit 1-like.	Prefoldin subunit 3-like.	0.992
ENSSGRP00000001925	LOC107588140	ENSSGRP00000001925	ENSSGRP00000094161	Prefoldin subunit 1-like.	Prefoldin subunit 3-like.	0.992
ENSSGRP00000001925	PFDN4	ENSSGRP00000001925	ENSSGRP00000006540	Prefoldin subunit 1-like.	Prefoldin subunit 4-like.	0.994
ENSSGRP00000001925	Pfdn5	ENSSGRP00000001925	ENSSGRP00000106865	Prefoldin subunit 1-like.	Prefoldin alpha subunit.	0.995
ENSSGRP00000001925	pfdn2	ENSSGRP00000001925	ENSSGRP00000023417	Prefoldin subunit 1-like.	Prefoldin subunit 2.	0.990
ENSSGRP00000001925	pfdn4	ENSSGRP00000001925	ENSSGRP00000085149	Prefoldin subunit 1-like.	Prefoldin subunit 4 isoform X1.	0.994
ENSSGRP00000001925	pfdn6	ENSSGRP00000001925	ENSSGRP00000032867	Prefoldin subunit 1-like.	Prefoldin beta subunit.	0.996
ENSSGRP00000005412	ENSSGRP00000001925	ENSSGRP00000005412	ENSSGRP00000001925	annotation not available	Prefoldin subunit 1-like.	0.996
ENSSGRP00000005412	ENSSGRP00000007037	ENSSGRP00000005412	ENSSGRP00000007037	annotation not available	annotation not available	0.994
ENSSGRP00000005412	ENSSGRP00000086148	ENSSGRP00000005412	ENSSGRP00000086148	annotation not available	Prefoldin subunit 2.	0.996
ENSSGRP00000005412	LOC107562614	ENSSGRP00000005412	ENSSGRP00000094204	annotation not available	Prefoldin subunit 3-like.	0.995
ENSSGRP00000005412	LOC107588140	ENSSGRP00000005412	ENSSGRP00000094161	annotation not available	Prefoldin subunit 3-like.	0.995
ENSSGRP00000005412	PFDN4	ENSSGRP00000005412	ENSSGRP00000006540	annotation not available	Prefoldin subunit 4-like.	0.995
ENSSGRP00000005412	Pfdn5	ENSSGRP00000005412	ENSSGRP00000106865	annotation not available	Prefoldin alpha subunit.	0.997
ENSSGRP00000005412	pfdn2	ENSSGRP00000005412	ENSSGRP00000023417	annotation not available	Prefoldin subunit 2.	0.996
ENSSGRP00000005412	pfdn4	ENSSGRP00000005412	ENSSGRP00000085149	annotation not available	Prefoldin subunit 4 isoform X1.	0.995
ENSSGRP00000005412	pfdn6	ENSSGRP00000005412	ENSSGRP00000032867	annotation not available	Prefoldin beta subunit.	0.544