Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107581848Contactin-1-like. (1043 aa)    
Predicted Functional Partners:
LOC107601289
Contactin-associated protein 1-like.
   
 0.928
ENSSGRP00000101259
Contactin associated protein 1.
   
 0.928
ENSSGRP00000090296
Neurofascin-like.
   
0.916
nfasc
Neurofascin.
   
0.915
LOC107560901
Neurofascin-like.
   
 0.911
ENSSGRP00000065152
Neuronal cell adhesion molecule-like.
   
 0.911
LOC107580043
Neuronal cell adhesion molecule-like isoform X1.
   
 0.906
LOC107587145
Neuronal cell adhesion molecule-like isoform X1.
   
 0.906
ENSSGRP00000032619
annotation not available
   
 0.903
ENSSGRP00000083000
Neuronal cell adhesion molecule-like isoform X1.
   
 0.903
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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