STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001946BRCA1-A complex subunit RAP80-like. (479 aa)    
Predicted Functional Partners:
ENSSGRP00000020638
BRISC and BRCA1-A complex member 1-like.
    
 0.984
LOC107569767
Lys-63-specific deubiquitinase BRCC36-like isoform X1.
    
 0.906
ENSSGRP00000082618
BRCA1/BRCA2-containing complex subunit 3.
    
 0.906
LOC107553730
BRCA1-A complex subunit BRE.
    
 0.906
babam2
BRCA1-A complex subunit BRE.
    
 0.906
LOC107587199
BRCA1-A complex subunit RAP80-like isoform X1.
     
 
0.900
ENSSGRP00000004768
annotation not available
    
 0.848
ENSSGRP00000042608
annotation not available
    
 0.848
ENSSGRP00000030630
BRCA1-associated RING domain protein 1-like.
    
 0.800
ENSSGRP00000091406
annotation not available
    
 0.800
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.