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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107598127Synaptotagmin-2-like isoform X1. (430 aa)    
Predicted Functional Partners:
LOC107583485
Stonin-2-like isoform X1.
   
 0.917
LOC107588275
Stonin-2-like isoform X1.
   
 0.917
LOC107589629
Synaptosomal-associated protein 25-B.
   
 0.895
LOC107599071
Synaptosomal-associated protein 25-A.
   
 0.895
SNAP25
Synaptosome associated protein 25.
   
 0.895
LOC107586606
Synaptosomal-associated protein 25-B-like.
   
 0.895
ENSSGRP00000002909
Vesicle-associated membrane protein 2-like.
   
 0.846
LOC107554313
Vesicle-associated membrane protein 2-like.
   
 0.846
ENSSGRP00000063700
Vesicle-associated membrane protein 2-like.
   
 0.846
ENSSGRP00000066179
Vesicle-associated membrane protein 1-like.
   
 0.846
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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