Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001949Supervillin a. (1871 aa)    
Predicted Functional Partners:
ENSSGRP00000007030
Kinesin family member 14.
    
 
 0.761
ENSSGRP00000063319
Kinesin family member 14.
    
 
 0.761
LOC107600016
Actin-binding protein anillin-like isoform X1.
    
 
 0.634
ENSSGRP00000097828
Anillin, actin binding protein.
    
 
 0.634
ENSSGRP00000106422
Actin-binding protein anillin-like.
    
 
 0.634
mlip
Muscular LMNA-interacting protein isoform X1.
      
 0.586
ENSSGRP00000030815
Spectrin alpha chain, non-erythrocytic 1-like isoform X1.
    
 
 0.530
Sptan1
Spectrin alpha chain, non-erythrocytic 1 isoform X1.
    
 
 0.530
fbxl22
F-box and leucine-rich repeat protein 22.
      
 0.517
LOC107565733
Claudin-19-like isoform X1.
      
 0.502
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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