STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107585137Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B-like. (380 aa)    
Predicted Functional Partners:
LOC107584072
Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase (sialyltransferase 7A).
    
 0.925
ENSSGRP00000104585
Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase (sialyltransferase 7A).
    
 0.925
ENSSGRP00000074199
Negative elongation factor C/D isoform X1.
    
 0.884
LOC107554192
Negative elongation factor C/D-like.
    
 0.884
LOC107587325
Negative elongation factor B-like.
   
 0.878
LOC107566125
Negative elongation factor B-like.
   
 0.878
ENSSGRP00000023637
Negative elongation factor E-like.
   
 0.866
LOC107584366
Negative elongation factor E-like.
   
 0.866
ENSSGRP00000006970
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 1-like isoform X1.
    
 0.852
LOC107586261
Transcription elongation factor SPT5-like isoform X1.
   
 0.813
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.