Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107590539Zinc finger protein 800-like. (533 aa)    
Predicted Functional Partners:
ENSSGRP00000110716
Zinc finger protein 622-like.
    
 
 0.591
ENSSGRP00000007976
annotation not available
    
   0.522
ENSSGRP00000028857
annotation not available
    
   0.522
LOC107549456
Glutamate-rich WD repeat-containing protein 1-like.
      
 0.509
LOC107598422
Glutamate-rich WD repeat-containing protein 1-like.
      
 0.509
LOC107582581
Uncharacterized protein LOC107582581.
      
 0.507
LOC107597512
Uncharacterized protein LOC107597512.
      
 0.507
Gart
Trifunctional purine biosynthetic protein adenosine-3.
     
  0.490
LOC107594049
Homeobox protein Hox-C1a-like.
    
 
 0.485
LOC107598919
Homeobox protein Hox-C1a-like.
    
 
 0.485
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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