Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001955Transcriptional activator MN1-like. (1037 aa)    
Predicted Functional Partners:
ENSSGRP00000030888
Ras-specific guanine nucleotide-releasing factor 2-like isoform X1.
     
 0.683
ss18l2
SS18-like protein 2.
      
 0.669
LOC107550901
Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2.
    
 
 0.591
ENSSGRP00000065929
Teashirt homolog 3-like.
      
 0.585
ENSSGRP00000083857
Teashirt homolog 3-like.
      
 0.585
ENSSGRP00000063676
Zinc finger homeobox protein 3-like.
      
 0.584
ENSSGRP00000067833
Zinc finger homeobox protein 3-like.
      
 0.584
ENSSGRP00000002359
High mobility group protein HMG-I/HMG-Y-like.
      
 0.567
LOC107587578
High mobility group protein HMG-I/HMG-Y-like isoform X1.
      
 0.567
CDK2AP1
Cyclin-dependent kinase 2-associated protein 1.
      
 0.551
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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